BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C05LP1|AL427285
(233 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1105 446 e-125
>3x_Contig1105
Length = 3123
Score = 446 bits (221), Expect = e-125
Identities = 226/231 (97%)
Strand = Plus / Minus
Query: 1 taccttctatatattaatattactcctttgggactattattataataatattcaccctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 taccttctatatattaatattactcctttgggactattattataataatattcaccctga 1280
Query: 61 taaaaatcagggttcgcggaattaaaaacattggaatatttttaatataataraaatata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1279 taaaaatcagggttcgcggaattaaaaacattggaatatttttaatataataaaaatata 1220
Query: 121 attrattattattatataccataggaataarattatatattatrtgtratatgtaatccc 180
||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 1219 attaattattattatataccataggaataaaattatatattatatgtaatatgtaatccc 1160
Query: 181 gcggtatactttatatgtataccgcgggggggggagagatataatttataa 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 gcggtatactttatatgtataccgcgggggggggagagatataatttataa 1109
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2374
Number of Sequences: 1807
Number of extensions: 2374
Number of successful extensions: 217
Number of sequences better than 1.0e-20: 1
length of query: 233
length of database: 10,358,551
effective HSP length: 15
effective length of query: 218
effective length of database: 10,331,446
effective search space: 2252255228
effective search space used: 2252255228
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)